Published in American Chemical Society, ACS In Focus Series, 2025
Comprehensive introduction to single-molecule RNA sequencing, covering Nanopore and PacBio technologies and their applications in research and medicine.
Published in Frontiers in Microbiology, 2024
Study exploring how MinD2 influences the cellular architecture and movement of the archaeon Haloferax volcanii.
Published in Nucleic Acids Research, 2024
We characterized the transcription elongation complex and Spt4/5 recruitment in Archaea at the structural level.
Published in Frontiers in Microbiology, 2023
Study exploring how the regulator EarA and transcription terminators influence archaellum formation in Pyrococcus furiosus.
Published in mBio, 2023
An integrated transcriptomics and proteomics study revealing stress response dynamics in a hyperthermophilic archaeon.
Published in Biological Chemistry, 2023
Study identifying how the archaeal Lsm protein interacts with RNA targets during transcription in Pyrococcus furiosus.
Published in mBio, 2023
In this study we assisted with data analysis of transcriptomics & proteomics data to look into the heat shock response of Sulfolobus
Published in RNA, 2023
We used Nanopore cDNA and direct RNA sequencing to explore rRNA processing and the stage-dependent installation of rRNA modifications in Archaea.
Published in RNA, 2022
Here we compared available Nanopore RNA-seq protocols for the analysis of multiple transcriptomic features in E. coli.
Published in Frontiers in Microbiology, 2021
This perspective is about requirements and functional implications of transcription-translation coupling in archaea.
Published in Nucleic Acids Research, 2021
Study be the Ferreira-Cerca lab analyzing the in vivo role of the universally conserved ribosomal RNA dimethyltransferase KsgA/Dim1 homolog in archaea.
Published in Frontiers in Microbiology, 2021
Integrating RNA-seq and ChiP-seq data we found out that CopR is the master regulator for copper homeostasis in Pyrococcus furiosus.
Published in Frontiers in Microbiology, 2019
RNA-supplemented re-annotation of the new Pyrococcus furiosus reference genome.