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We used Nanopore cDNA and direct RNA sequencing to explore rRNA processing and the stage-dependent installation of rRNA modifications in Archaea.
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In this study we assisted with data analysis of transcriptomics & proteomics data to look into the heat shock response of Sulfolobus
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This study investigates the role of archaeal Sm-like proteins (PfuSmAP1) in posttranscriptional processes in the hyperthermophile Pyrococcus furiosus.
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Here we compared available Nanopore RNA-seq protocols for the analysis of multiple transcriptomic features in E. coli.
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Integrating RNA-seq and ChiP-seq data we found out that CopR is the master regulator for copper homeostasis in Pyrococcus furiosus.
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Study be the Ferreira-Cerca lab analyzing the in vivo role of the universally conserved ribosomal RNA dimethyltransferase KsgA/Dim1 homolog in archaea.
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This perspective is about requirements and functional implications of transcription-translation coupling in archaea.
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RNA-supplemented re-annotation of the new Pyrococcus furiosus reference genome.