PUBLICATIONS
Scientific output
Research articles and methods publications spanning RNA biology, molecular microbiology, sequencing technology, transcriptomics, proteomics and computational analysis.
16 peer-reviewed journal articles · 1 methods book · preprints excluded
2026
2026Research article
CsmR controls both, motility and cell shape, in Haloferax volcanii
Nußbaum P, Grünberger F, Neuschütz F, Chou K, Sivabalasarma S, Eulitz A, et al.
PLoS Genetics 22(6): e1012198.
DOI →
2025
2025Research article
Pan-modification profiling facilitates a cross-evolutionary dissection of the thermoregulated ribosomal epitranscriptome
Garcia-Campos MA, Georgeson J, Nir R, Reichelt R, Fluke KA, Matzov D, Iyer V, Burkhart BW, Lui L, Kustanovich A, Grünberger F, et al.
Cell 188(24): 6825–6844.e28.
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2025Research article
Impact of changed c-di-AMP levels and hypoosmotic stress on the transcriptome of Haloferax volcanii and on RCK domain-containing proteins
Ren H, Braun F, Grünberger F, van der Does C, Grohmann D, Albers S-V.
microLife 6: uqaf037.
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2025Methods book
Single-Molecule Sequencing of RNA
Grohmann D & Grünberger F.
ACS In Focus. American Chemical Society.
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2024
2024Research article
MinD2 modulates cell shape and motility in the archaeon Haloferax volcanii
Patro M, Grünberger F, Sivabalasarma S, Gfrerer S, Rodriguez-Franco M, Nußbaum P, et al.
Frontiers in Microbiology 15: 1474570.
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2024Research article
Structural basis of archaeal RNA polymerase transcription elongation and Spt4/5 recruitment
Tarău D, Grünberger F, Pilsl M, Reichelt R, Heiß F, König S, Urlaub H, Hausner W, Engel C, Grohmann D.
Nucleic Acids Research 52(10): 6017–6035.
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2023
2023Research article
Uncovering the temporal dynamics and regulatory networks of thermal stress response in a hyperthermophile using transcriptomics and proteomics
Grünberger F, Schmid G, El Ahmad Z, Fenk M, Vogl K, Reichelt R, Hausner W, Urlaub H, Lenz C, Grohmann D.
mBio 14(6): e02174-23.
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2023Research article
The transcriptional regulator EarA and intergenic terminator sequences modulate archaellation in Pyrococcus furiosus
Stöckl R, Nißl L, Reichelt R, Rachel R, Grohmann D, Grünberger F.
Frontiers in Microbiology 14: 1241399.
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2023Research article
The archaeal Lsm protein from Pyrococcus furiosus binds co-transcriptionally to poly(U)-rich target RNAs
Reichelt R, Rothmeier T, Grünberger F, Willkomm S, Bruckmann A, Hausner W, et al.
Biological Chemistry 404: 1085–1100.
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2023Research article
Transcriptional and translational dynamics underlying heat shock response in the thermophilic crenarchaeon Sulfolobus acidocaldarius
Baes R, Grünberger F, Pyr Dit Ruys S, Couturier M, De Keulenaer S, Skevin S, Van Nieuwerburgh F, Vertommen D, Peeters E.
mBio 14(5): e03593-22.
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2022
2022Research article
Methanofollis propanolicus sp. nov., a novel archaeal isolate from a Costa Rican oil well that uses propanol for methane production
Dengler L, Meier J, Grünberger F, Bellack A, Rachel R, Grohmann D, Huber H.
Archives of Microbiology 204: 554.
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2022Research article
Nanopore sequencing of RNA and cDNA molecules in Escherichia coli
Grünberger F, Ferreira-Cerca S, Grohmann D.
RNA 28: 400–417.
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2021
2021Research article
Insights into synthesis and function of KsgA/Dim1-dependent rRNA modifications in archaea
Knüppel R, Trahan C, Kern M, Wagner A, Grünberger F, Hausner W, Quax TEF, Albers S-V, Oeffinger M, Ferreira-Cerca S.
Nucleic Acids Research 49: 1662–1687.
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2021Review
Coupling of transcription and translation in archaea: cues from the bacterial world
Weixlbaumer A, Grünberger F, Werner F, Grohmann D.
Frontiers in Microbiology 12: 661827.
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2020
2020Research article
CopR, a global regulator of transcription to maintain copper homeostasis in Pyrococcus furiosus
Grünberger F, Reichelt R, Waege I, Ned V, Bronner K, Kaljanac M, Weber N, El Ahmad Z, Knauss L, et al.
Frontiers in Microbiology 11: 613532.
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2019
2019Research article
Next generation DNA-seq and differential RNA-seq allow re-annotation of the Pyrococcus furiosus DSM 3638 genome and provide insights into archaeal antisense transcription
Grünberger F, Reichelt R, Bunk B, Spröer C, Overmann J, Rachel R, Grohmann D.
Frontiers in Microbiology 10: 1603.
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This page lists final journal publications and the ACS methods book. Preprints and the doctoral dissertation are intentionally excluded.