Insights into rRNA processing and modifications in Archaea using Nanopore-based RNA sequencing

Here we describe tools and custom R scripts to analyse rRNA processing and modification in Archaea using Nanopore-based direct cDNA and direct RNA sequencing.
If you´re interested you can read our previous pre-print on biorxiv:
Exploring prokaryotic transcription, operon structures, rRNA maturation and modifications using Nanopore-based native RNA sequencing.

Processing analysis Modified base detection Find the code on GitHub

The repository is currently actively developed.